spacer
spacer

PDBsum entry 4l76

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4l76 calculated with MOLE 2.0 PDB id
4l76
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.59 46.6 -0.16 0.10 20.5 84 3 7 1 9 3 0 0  
2 1.27 3.29 50.6 -0.16 0.10 20.5 83 6 7 1 8 3 0 0  
3 1.23 1.52 62.4 -0.45 0.01 19.9 83 5 7 3 9 4 1 0  
4 1.21 1.15 120.2 -1.68 -0.16 30.8 81 16 15 3 11 3 2 0  CA 402 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer