PDBsum entry 4l6d Go to PDB code:  Pore analysis for: 4l6d calculated with MOLE 2.0 PDB id 4l6d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.52 48.6 -1.92 -0.26 17.9 79 4 1 3 3 4 1 0  VNL 402 C EPE 404 D EPE 404 F 2 1.30 1.40 71.2 -2.35 -0.70 30.8 83 9 8 4 6 0 2 0   3 2.69 4.15 74.3 -2.79 0.00 33.2 68 13 6 0 0 5 4 0  VNL 403 C VNL 403 D EPE 404 D VNL 403 F VNL 403 G EPE 405 G 4 1.24 2.68 75.8 -2.41 -0.69 31.9 81 9 8 3 6 0 2 0   5 2.74 2.72 75.9 -2.76 -0.08 32.6 69 14 6 0 0 5 3 0  VNL 404 A VNL 403 D EPE 404 D VNL 404 E EPE 405 E VNL 403 F 6 2.83 4.30 76.6 -2.78 -0.09 32.4 69 15 6 0 0 5 4 0  VNL 403 B EPE 405 B VNL 403 D EPE 404 D VNL 403 F VNL 403 H 7 1.31 1.42 77.5 -2.52 -0.70 32.7 81 10 8 3 6 0 2 0   8 2.58 4.03 84.4 -2.63 0.03 30.8 67 13 6 0 0 6 4 0  VNL 403 B EPE 405 B VNL 403 C VNL 403 G EPE 405 G VNL 403 H 9 2.63 4.17 89.9 -2.75 -0.12 32.3 68 16 6 0 0 6 5 0  VNL 404 A VNL 403 C VNL 404 E EPE 405 E VNL 403 G EPE 405 G 10 1.32 1.45 96.4 -2.45 -0.31 27.2 74 12 9 2 3 3 7 0  VNL 403 C VNL 403 G EPE 405 G 11 1.32 1.45 96.3 -2.44 -0.32 26.6 74 12 9 2 3 3 7 0  VNL 403 D EPE 404 D VNL 403 F 12 1.31 1.43 97.8 -2.35 -0.28 25.2 73 11 9 2 3 3 8 0  VNL 403 B EPE 405 B VNL 403 H 13 1.32 1.43 99.5 -2.33 -0.30 25.1 75 13 9 2 3 3 6 0  VNL 404 A VNL 404 E EPE 405 E 14 1.32 1.44 101.2 -2.52 -0.34 27.8 73 13 9 1 3 3 7 0  VNL 403 D EPE 404 D VNL 403 F 15 1.32 1.43 101.3 -2.52 -0.33 28.2 73 13 9 1 3 3 7 0  VNL 403 C VNL 403 G EPE 405 G 16 1.32 1.45 102.7 -2.40 -0.28 25.6 72 12 9 1 3 3 8 0  VNL 403 B EPE 405 B VNL 403 H 17 1.32 1.43 104.4 -2.36 -0.32 25.4 74 14 9 1 3 3 6 0  VNL 404 A VNL 404 E EPE 405 E 18 1.31 1.40 104.6 -2.57 -0.36 28.5 74 13 9 2 2 3 7 0  VNL 403 D EPE 404 D VNL 403 F 19 1.33 1.44 105.0 -2.56 -0.38 28.7 76 14 9 2 2 2 7 0  VNL 403 D EPE 404 D VNL 403 F 20 1.30 1.41 104.6 -2.55 -0.35 28.7 74 13 9 2 2 3 7 0  VNL 403 C VNL 403 G EPE 405 G 21 1.31 1.39 106.0 -2.43 -0.31 26.5 73 12 9 2 2 3 7 0  VNL 403 B EPE 405 B VNL 403 H 22 1.30 1.40 107.7 -2.44 -0.32 26.8 74 14 9 2 2 3 6 0  VNL 404 A VNL 404 E EPE 405 E 23 2.43 2.60 115.6 -2.24 -0.30 24.8 77 10 9 2 2 2 6 0  VNL 403 D EPE 404 D VNL 403 F 24 1.28 1.41 127.4 -2.52 -0.39 28.5 76 15 10 2 3 2 7 0  VNL 403 D EPE 404 D VNL 403 F 25 1.31 1.43 131.2 -2.32 -0.54 25.0 78 13 12 4 6 0 10 0   26 1.28 1.38 136.1 -2.44 -0.38 27.8 75 15 10 2 3 3 7 0  VNL 403 C VNL 403 G EPE 405 G 27 1.31 1.44 141.7 -2.04 -0.52 22.1 81 9 12 4 5 0 9 0   28 1.31 1.46 146.6 -2.10 -0.49 21.9 80 10 12 3 5 0 9 0   29 1.30 1.40 149.9 -2.19 -0.53 23.5 80 10 12 4 4 0 9 0   30 1.29 1.38 153.6 -2.36 -0.56 25.4 79 15 13 4 6 0 10 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.