 |
PDBsum entry 4l4l
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4l4l calculated with MOLE 2.0
|
PDB id
|
|
|
|
4l4l
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 tunnels,
coloured by tunnel radius |
 |
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.72 |
1.75 |
27.0 |
-3.03 |
-0.62 |
37.7 |
85 |
 |
8 |
5 |
4 |
0 |
0 |
0 |
1 |
 |
1XC 601 A PO4 602 A PO4 603 B
|
 |
 |
2 |
 |
1.74 |
1.76 |
30.8 |
-2.73 |
-0.68 |
32.8 |
88 |
8 |
5 |
4 |
0 |
0 |
0 |
0 |
PO4 603 A 1XC 601 B PO4 602 B
|
 |
3 |
 |
1.53 |
2.72 |
41.4 |
-2.14 |
-0.70 |
26.2 |
86 |
7 |
5 |
3 |
0 |
1 |
0 |
0 |
PO4 603 A 1XC 601 B PO4 602 B
|
 |
4 |
 |
1.77 |
1.80 |
46.5 |
-0.83 |
0.00 |
18.0 |
86 |
5 |
3 |
5 |
5 |
3 |
2 |
0 |
1XC 601 B PO4 602 B
|
 |
5 |
 |
1.71 |
1.76 |
49.2 |
-0.77 |
0.05 |
19.0 |
84 |
6 |
5 |
3 |
5 |
3 |
2 |
1 |
1XC 601 A PO4 602 A EDO 605 A
|
 |
6 |
 |
1.50 |
1.66 |
20.4 |
-0.22 |
0.18 |
17.6 |
76 |
2 |
1 |
1 |
2 |
2 |
0 |
0 |
|
 |
7 |
 |
1.25 |
1.32 |
15.4 |
-0.59 |
-0.13 |
15.7 |
72 |
2 |
2 |
0 |
2 |
3 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |