PDBsum entry 4l34

Tunnel analysis for: 4l34 calculated with

MOLE 2.0

PDB id

4l34

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

5 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.35

2.06

25.8

-0.40

0.13

9.7

69

1

3

0

4

6

3

0

2

1.33

1.42

26.2

-0.15

0.20

8.0

80

4

2

2

7

7

3

0

1VG 1204 A

3

1.25

1.25

27.1

-0.79

-0.18

11.1

70

2

2

2

2

4

4

0

4

1.24

1.24

32.1

-0.93

-0.41

12.4

84

7

1

6

4

2

4

0

SO4 1202 A

5

1.25

1.25

33.9

-2.15

-0.60

27.2

87

7

4

6

2

1

4

0

SO4 1202 A

6

1.04

1.45

37.7

-1.54

-0.48

16.9

86

6

1

5

7

1

2

0

SO4 1202 A

7

1.20

1.49

39.2

-0.53

-0.26

12.1

85

8

1

7

6

3

2

1

SO4 1202 A

8

1.26

1.31

39.2

-0.80

-0.16

13.9

81

6

2

4

7

6

3

0

SO4 1202 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.