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PDBsum entry 4l2d
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Tunnel analysis for: 4l2d calculated with  MOLE 2.0
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PDB id
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4l2d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.48 |
1.48 |
19.5 |
-1.76 |
-0.38 |
20.2 |
78 |
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3 |
2 |
2 |
1 |
3 |
1 |
0 |
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2 |
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1.52 |
1.54 |
20.5 |
-2.09 |
-0.45 |
23.6 |
79 |
3 |
2 |
2 |
0 |
2 |
1 |
0 |
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3 |
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1.51 |
1.53 |
24.3 |
-1.64 |
-0.28 |
17.0 |
80 |
3 |
2 |
5 |
0 |
4 |
0 |
0 |
GLC 1 H GLC 2 H
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4 |
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1.48 |
1.48 |
25.2 |
-1.55 |
-0.29 |
15.8 |
81 |
2 |
2 |
5 |
0 |
4 |
0 |
0 |
GLC 1 F GLC 2 F
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5 |
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1.44 |
1.44 |
20.9 |
-2.01 |
-0.37 |
21.3 |
79 |
3 |
1 |
3 |
0 |
3 |
1 |
0 |
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6 |
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1.36 |
1.36 |
23.4 |
-1.68 |
-0.38 |
19.5 |
80 |
3 |
2 |
3 |
1 |
3 |
1 |
0 |
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7 |
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1.27 |
1.39 |
24.1 |
-1.20 |
-0.26 |
12.3 |
80 |
1 |
1 |
5 |
0 |
4 |
0 |
0 |
GLC 1 G GLC 2 G
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8 |
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1.34 |
1.34 |
28.5 |
-1.49 |
-0.38 |
13.3 |
81 |
2 |
2 |
5 |
0 |
4 |
0 |
0 |
GLC 1 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program