spacer
spacer

PDBsum entry 4l2a

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4l2a calculated with MOLE 2.0 PDB id
4l2a
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 1.62 19.0 -1.70 -0.37 20.9 78 3 2 2 1 3 1 0  
2 1.44 1.50 20.1 -2.20 -0.33 23.6 79 3 1 3 0 3 1 0  
3 1.36 1.42 25.6 -1.46 -0.26 17.9 76 2 2 3 0 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer