 |
PDBsum entry 4l1u
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4l1u calculated with MOLE 2.0
|
PDB id
|
|
|
|
4l1u
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.28 |
2.34 |
29.3 |
-0.50 |
0.11 |
14.6 |
82 |
 |
5 |
0 |
1 |
4 |
2 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.28 |
2.33 |
36.7 |
-0.48 |
0.08 |
12.8 |
82 |
6 |
0 |
1 |
4 |
2 |
1 |
0 |
|
 |
3 |
 |
3.46 |
4.78 |
41.6 |
-1.79 |
-0.29 |
31.2 |
81 |
5 |
4 |
2 |
3 |
0 |
0 |
0 |
SO4 503 A SO4 501 C SO4 502 F
|
 |
4 |
 |
1.46 |
1.46 |
70.4 |
-2.21 |
-0.34 |
22.4 |
80 |
7 |
2 |
5 |
5 |
1 |
1 |
0 |
SO4 507 D GOL 508 D TPO 784 G
|
 |
5 |
 |
1.40 |
1.40 |
73.5 |
-2.41 |
-0.54 |
26.5 |
79 |
9 |
5 |
6 |
3 |
1 |
2 |
0 |
SO4 506 B SO4 507 D GOL 508 D TPO 784 G
|
 |
6 |
 |
1.28 |
2.30 |
81.3 |
-1.73 |
-0.28 |
26.4 |
77 |
10 |
5 |
2 |
8 |
2 |
2 |
0 |
SO4 506 B SO4 507 D GOL 508 D
|
 |
7 |
 |
1.23 |
1.21 |
126.9 |
-1.13 |
-0.36 |
19.9 |
79 |
6 |
4 |
1 |
4 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |