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PDBsum entry 4l0c

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Pore analysis for: 4l0c calculated with MOLE 2.0 PDB id
4l0c
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 3.13 25.1 -1.01 0.15 10.4 72 3 1 2 1 4 0 0  MSE 239 C ACY 301 C
2 1.48 1.69 25.8 0.59 0.40 9.6 81 2 1 1 5 3 0 0  MSE 95 C MSE 239 C ACY 301 C
3 1.47 3.02 27.9 -0.92 0.21 8.8 73 2 1 2 1 4 0 0  MSE 239 H ACY 301 H PEG 302 H
4 1.49 3.37 29.4 -0.43 0.12 14.3 72 3 4 2 3 5 0 0  MSE 1 E MSE 239 E ACY 301 E
5 1.46 1.73 29.9 0.30 0.33 8.7 82 2 1 1 5 3 0 0  MSE 95 A MSE 239 A ACY 301 A
6 1.47 2.90 44.4 -0.98 0.09 12.6 75 2 2 3 1 4 1 0  MSE 239 A ACY 301 A
7 1.79 1.85 44.7 -1.23 -0.50 20.3 77 2 9 1 3 2 2 0  MSE 1 E
8 1.79 1.84 44.9 -1.81 -0.66 23.6 73 3 6 1 0 3 3 0  MSE 1 A
9 2.26 2.44 46.8 -1.48 -0.54 24.1 74 1 9 2 3 4 2 0  MSE 1 A MSE 1 E
10 3.58 3.58 50.4 -2.25 -0.75 21.9 74 3 9 2 1 1 4 0  MSE 1 E
11 2.17 2.24 50.5 -1.57 -0.38 20.8 76 4 7 2 2 2 4 0  MSE 1 A
12 1.48 1.74 50.9 -0.11 0.09 11.6 80 3 3 3 6 4 1 0  MSE 95 A MSE 239 A ACY 301 A
13 1.48 2.94 59.7 -1.59 -0.24 20.3 75 5 3 3 1 5 1 0  MSE 239 A ACY 301 A
14 2.17 2.24 60.0 -2.35 -0.52 26.4 73 6 5 1 0 3 3 0  MSE 1 A
15 1.79 1.85 61.5 -1.93 -0.66 24.9 77 6 9 1 2 1 4 0  
16 1.50 1.54 64.0 -0.32 -0.09 14.3 76 4 5 3 8 7 1 0  MSE 1 A MSE 95 G MSE 239 G ACY 301 G
17 1.46 1.72 64.0 -0.37 0.00 13.5 76 4 7 2 9 6 1 0  MSE 1 E MSE 95 G MSE 239 G ACY 301 G
18 1.43 3.14 102.1 -1.08 -0.26 18.5 82 8 8 6 8 5 1 0  MSE 95 D MSE 239 D ACY 301 D MSE 1 E MSE 150 F
19 1.48 3.10 105.9 -0.79 -0.27 14.4 84 6 6 6 8 4 2 0  MSE 95 D MSE 239 D ACY 301 D MSE 150 F
20 1.49 1.74 30.5 0.02 0.21 10.7 83 2 2 1 5 3 0 0  MSE 95 B MSE 239 B ACY 301 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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