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PDBsum entry 4l04
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Tunnel analysis for: 4l04 calculated with  MOLE 2.0
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PDB id
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4l04
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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18 tunnels,
coloured by tunnel radius |
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16 tunnels,
coloured by
tunnel radius
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16 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.51 |
29.8 |
-0.96 |
-0.13 |
20.9 |
90 |
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5 |
1 |
3 |
5 |
1 |
0 |
0 |
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NAP 503 C
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2 |
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1.31 |
1.45 |
31.7 |
-0.65 |
-0.12 |
19.7 |
88 |
5 |
2 |
3 |
4 |
1 |
0 |
0 |
NAP 503 C
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3 |
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1.31 |
1.44 |
32.3 |
-0.84 |
-0.06 |
20.2 |
82 |
5 |
1 |
3 |
5 |
2 |
0 |
0 |
NAP 503 C
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4 |
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1.32 |
1.44 |
39.2 |
-0.46 |
-0.22 |
16.2 |
86 |
3 |
2 |
2 |
5 |
1 |
0 |
0 |
NAP 503 C
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5 |
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1.24 |
1.24 |
31.8 |
-0.47 |
-0.07 |
16.1 |
87 |
5 |
2 |
3 |
4 |
1 |
0 |
0 |
NAP 502 B
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6 |
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1.25 |
1.25 |
33.6 |
-0.60 |
0.16 |
14.5 |
80 |
5 |
0 |
3 |
5 |
3 |
0 |
0 |
NAP 502 B
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7 |
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1.31 |
1.46 |
34.4 |
-1.20 |
-0.62 |
13.8 |
82 |
3 |
4 |
1 |
3 |
1 |
0 |
0 |
AKG 501 B NAP 502 B
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8 |
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1.25 |
1.25 |
40.2 |
-0.40 |
-0.26 |
11.8 |
86 |
3 |
1 |
5 |
6 |
1 |
1 |
1 |
NAP 502 B
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9 |
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1.25 |
1.25 |
40.3 |
-0.53 |
-0.17 |
16.4 |
85 |
4 |
3 |
1 |
5 |
1 |
0 |
0 |
NAP 502 B
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10 |
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1.34 |
1.47 |
56.7 |
-0.88 |
-0.46 |
13.6 |
81 |
3 |
4 |
5 |
7 |
1 |
1 |
1 |
AKG 501 B NAP 502 B
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11 |
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1.24 |
1.31 |
15.1 |
-1.72 |
-0.74 |
16.4 |
80 |
2 |
2 |
2 |
0 |
1 |
1 |
0 |
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12 |
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1.40 |
1.40 |
25.3 |
-0.91 |
-0.41 |
14.3 |
90 |
4 |
1 |
3 |
3 |
1 |
0 |
0 |
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13 |
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1.23 |
1.40 |
15.6 |
0.92 |
0.29 |
3.9 |
88 |
1 |
1 |
1 |
5 |
1 |
1 |
0 |
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14 |
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1.31 |
1.51 |
20.5 |
2.58 |
0.84 |
0.8 |
69 |
0 |
0 |
0 |
6 |
3 |
0 |
0 |
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15 |
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1.82 |
1.97 |
18.1 |
0.08 |
-0.02 |
10.7 |
86 |
2 |
0 |
0 |
4 |
1 |
0 |
0 |
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16 |
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1.55 |
1.91 |
15.9 |
0.55 |
0.07 |
8.7 |
86 |
2 |
0 |
0 |
5 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program