PDBsum entry 4k5h

Pore analysis for: 4k5h calculated with

MOLE 2.0

PDB id

4k5h

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

2 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.06

2.11

34.2

-0.39

0.03

10.2

76

2

3

4

5

4

1

1

HEM 501 B 1Q6 503 B ACT 504 B ACT 505 B GOL 506 B

2

2.01

2.05

38.7

-0.41

-0.03

10.6

75

3

3

4

4

4

1

1

HEM 501 A 1Q6 503 A ACT 504 A ACT 505 A GOL 506 A

3

1.36

1.34

59.9

-0.86

-0.14

11.2

74

6

3

5

5

4

5

2

4

2.05

2.11

64.1

-0.91

-0.13

16.1

79

6

2

2

7

3

3

1

HEM 501 B 1Q6 503 B ACT 504 B

5

2.78

3.27

68.3

-2.37

-0.68

18.2

83

4

4

8

1

1

1

0

6

1.29

1.35

82.9

-0.46

-0.07

9.6

74

3

3

5

11

6

7

3

HEM 501 A 1Q6 503 A ACT 504 A

7

1.40

1.40

106.6

-0.07

0.01

9.1

78

2

4

6

19

8

7

4

HEM 501 A 1Q6 503 A ACT 504 A HEM 501 B 1Q6 503 B
ACT 504 B

8

2.02

2.05

106.5

-1.20

-0.35

13.0

82

7

4

11

7

4

2

1

HEM 501 A 1Q6 503 A ACT 504 A

9

1.49

1.59

139.6

-1.22

-0.35

12.1

79

8

6

14

10

7

5

3

HEM 501 B 1Q6 503 B ACT 504 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.