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PDBsum entry 4jsx

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4jsx calculated with MOLE 2.0 PDB id
4jsx
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 2.04 52.4 -1.56 -0.48 15.5 78 5 4 6 5 1 5 1  
2 2.69 2.77 66.4 -1.15 -0.27 20.1 80 11 10 3 12 2 6 0  
3 1.39 2.92 71.3 -1.06 -0.30 20.5 73 6 7 3 15 2 5 0  
4 1.27 1.36 94.4 -1.29 -0.30 16.8 78 10 7 7 9 6 3 0  
5 2.50 3.23 93.3 -1.45 -0.18 22.2 81 14 12 6 15 3 6 0  
6 1.39 2.40 101.1 -1.89 -0.46 27.4 76 11 13 4 13 3 5 0  
7 1.50 1.51 111.1 -1.29 -0.31 18.9 86 13 6 10 17 4 6 0  
8 1.34 1.60 120.4 -1.19 -0.17 18.9 80 13 11 6 17 6 4 0  
9 1.36 1.59 128.4 -1.77 -0.39 23.2 79 17 13 5 16 6 4 0  
10 1.51 1.51 131.8 -0.96 -0.29 15.7 85 14 9 13 22 4 8 0  
11 1.41 1.43 135.3 -1.59 -0.25 21.5 86 14 9 13 19 4 7 0  
12 2.14 2.41 143.4 -2.50 -0.56 24.9 82 24 9 11 11 3 1 0  
13 1.50 1.50 139.2 -1.10 -0.33 15.8 84 12 8 12 21 4 11 0  
14 1.31 1.47 153.2 -2.25 -0.49 22.1 82 18 11 16 11 5 7 0  
15 1.33 2.22 159.7 -1.65 -0.56 21.1 80 16 13 13 20 4 11 0  
16 2.02 2.49 168.6 -1.76 -0.39 20.3 83 22 12 15 15 4 3 0  
17 1.25 1.39 189.3 -0.91 -0.30 14.8 83 7 9 11 13 5 7 1  
18 1.72 1.73 204.3 -1.84 -0.47 19.2 84 24 8 21 20 6 6 0  
19 1.31 1.47 209.1 -2.27 -0.47 24.1 81 26 17 17 15 6 4 0  
20 1.30 1.28 293.6 -1.96 -0.46 21.7 81 26 19 20 18 6 8 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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