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PDBsum entry 4jsu

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Pore analysis for: 4jsu calculated with MOLE 2.0 PDB id
4jsu
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 1.97 52.5 -0.42 -0.26 13.3 87 5 3 3 8 1 0 0  
2 1.84 3.13 89.4 -2.09 -0.48 23.8 87 7 5 5 3 0 2 0  
3 1.48 1.69 90.2 -2.16 -0.64 24.0 83 6 12 5 3 2 3 0  
4 1.80 3.30 113.6 -1.15 -0.19 13.7 79 8 6 12 7 7 6 0  
5 1.69 1.66 121.2 -2.12 -0.51 25.6 81 11 9 8 3 4 2 1  
6 1.51 1.71 124.6 -1.48 -0.40 16.9 77 5 14 10 5 9 5 0  
7 1.23 1.39 127.6 -2.59 -0.47 31.9 81 17 8 7 7 4 2 0  
8 1.53 3.99 133.7 -2.36 -0.41 31.5 77 15 13 4 6 5 2 0  
9 1.81 1.88 132.3 -2.47 -0.53 29.0 80 16 14 8 4 6 0 0  
10 1.84 2.55 142.1 -2.41 -0.42 28.4 80 21 10 9 7 5 2 0  
11 1.48 1.63 156.0 -2.14 -0.51 25.3 82 14 13 11 6 3 5 1  
12 1.64 2.05 158.5 -1.93 -0.30 23.5 83 18 8 14 11 6 3 0  
13 1.25 1.48 165.2 -1.76 -0.44 19.0 88 14 4 16 6 4 2 2  ACA 4 e TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
14 2.11 2.56 187.8 -1.80 -0.36 19.3 85 14 7 16 9 7 3 2  TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
15 1.53 2.40 191.8 -1.46 -0.32 17.1 86 17 7 18 10 6 2 3  TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
16 1.52 3.97 192.0 -1.86 -0.42 21.5 85 18 10 16 8 4 2 2  TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
17 1.26 1.41 199.9 -2.36 -0.52 25.0 85 17 9 15 4 7 0 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
18 1.28 1.40 206.3 -1.81 -0.48 20.7 84 15 15 15 8 8 1 0  MES 301 Y RE0 7 d ABN 8 d TY5 5 f
19 1.54 1.38 212.2 -1.85 -0.38 22.6 84 19 10 14 12 4 4 2  ACA 4 e TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
20 1.98 2.01 213.7 -1.68 -0.35 18.6 86 20 7 18 11 4 4 2  TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
21 1.37 1.43 216.7 -1.85 -0.43 20.7 87 19 13 21 13 3 2 2  TY5 5 e ACA 4 f TY5 5 f RE0 7 f ABN 8 f
22 1.65 1.48 221.5 -2.57 -0.47 30.1 80 24 13 11 8 6 2 0  TY5 5 e ACA 4 f TY5 5 f
23 1.79 1.90 222.6 -2.29 -0.44 24.3 82 18 13 15 7 10 1 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
24 1.99 1.92 226.7 -2.33 -0.47 26.7 83 21 16 15 6 7 0 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
25 1.55 2.08 226.5 -1.91 -0.39 21.5 84 20 12 17 8 9 0 1  TY5 5 e ACA 4 f TY5 5 f
26 1.53 1.35 240.0 -2.27 -0.38 26.3 83 24 12 17 12 8 3 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
27 1.66 2.07 247.0 -2.27 -0.45 26.9 82 22 15 13 10 7 2 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
28 1.86 1.86 248.5 -2.13 -0.40 23.1 84 23 12 17 9 8 2 0  ACA 4 e TY5 5 e ACA 4 f TY5 5 f
29 1.38 1.39 251.5 -2.24 -0.48 24.9 85 22 18 20 11 6 0 0  TY5 5 e ACA 4 f TY5 5 f
30 1.61 2.08 275.5 -1.89 -0.33 22.8 79 23 13 17 13 12 6 0  ACA 4 e TY5 5 e TY5 5 f

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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