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PDBsum entry 4jpl

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Tunnel analysis for: 4jpl calculated with MOLE 2.0 PDB id
4jpl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 3.74 25.3 -0.09 0.23 12.3 74 2 1 2 7 2 2 0  HEM 301 A
2 1.17 3.79 34.1 -0.53 -0.12 10.9 76 2 1 2 6 3 0 0  HEM 301 A 4JP 302 A
3 1.16 3.75 38.6 -1.15 0.09 19.9 76 4 2 3 6 3 1 0  HEM 301 A
4 1.63 1.63 22.9 -0.07 -0.16 12.7 82 2 1 1 3 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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