PDBsum entry 4jnh Go to PDB code:  Tunnel analysis for: 4jnh calculated with MOLE 2.0 PDB id 4jnh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.46 16.2 0.80 0.10 2.7 69 0 1 1 5 2 0 0  MSE 157 A MSE 157 B 2 1.23 1.64 17.6 0.50 0.00 8.7 72 0 2 1 5 1 0 0  MSE 157 A MSE 157 B 3 1.32 2.06 19.3 0.41 0.40 7.2 78 0 2 1 3 2 0 0  MSE 157 B 4 1.21 1.63 19.6 0.06 0.32 13.8 78 0 4 1 3 2 0 0  MSE 157 B 5 1.23 1.64 28.9 0.48 0.18 11.8 78 1 4 1 6 3 0 0  MSE 157 A MSE 157 B 6 1.43 2.80 33.8 0.72 0.30 8.0 81 1 3 2 6 3 0 0  MSE 157 A MSE 157 B 7 1.23 1.61 35.1 0.51 0.17 10.9 81 1 3 2 6 3 0 0  MSE 157 A MSE 157 B 8 1.43 1.66 16.1 -0.11 -0.27 4.3 72 0 1 2 3 2 1 0   9 1.37 1.37 15.7 0.47 -0.17 5.5 90 1 0 1 2 1 0 0  MSE 53 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.