PDBsum entry 4jn3 Go to PDB code:  Tunnel analysis for: 4jn3 calculated with MOLE 2.0 PDB id 4jn3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 2.45 35.7 0.90 0.15 2.0 77 1 0 2 5 4 2 0  MSE 165 B MSE 366 B MSE 381 B 2 1.38 2.36 43.4 0.60 0.09 6.8 79 2 2 1 7 3 2 0  MSE 165 B MSE 366 B MSE 381 B 3 1.38 2.48 52.1 -0.39 -0.16 12.3 84 4 3 4 6 3 2 0  MSE 165 B 4 1.40 1.44 54.7 0.43 -0.06 3.6 84 2 1 3 9 3 3 0  MSE 165 B MSE 366 B MSE 381 B 5 1.53 1.65 15.7 -1.45 -0.59 10.6 76 2 1 1 0 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.