PDBsum entry 4jmq Go to PDB code:  Tunnel analysis for: 4jmq calculated with MOLE 2.0 PDB id 4jmq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.49 39.6 -0.87 -0.26 12.9 82 2 3 5 4 2 0 0   2 1.25 1.41 48.5 -1.09 -0.31 13.6 77 4 4 3 4 2 0 0   3 1.23 1.48 57.0 -1.50 -0.39 19.5 78 4 6 5 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.