PDBsum entry 4jm2 Go to PDB code:  Tunnel analysis for: 4jm2 calculated with MOLE 2.0 PDB id 4jm2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.27 21.4 1.88 0.43 1.2 79 0 0 3 6 2 1 0   2 1.26 1.26 22.3 1.81 0.41 1.3 79 0 0 3 6 2 1 0   3 1.26 2.44 24.4 -0.27 -0.51 2.0 96 0 0 6 4 0 0 0   4 1.30 1.30 25.2 0.80 -0.13 4.8 84 1 1 4 6 1 0 0   5 1.26 2.48 25.2 -0.16 -0.48 1.9 96 0 0 6 4 0 0 0   6 1.28 1.28 26.0 0.81 -0.14 4.5 84 1 1 4 6 1 0 0   7 1.26 1.26 26.7 0.86 -0.18 3.2 88 0 2 4 6 0 0 0   8 1.28 1.28 27.5 0.85 -0.17 3.1 88 0 2 4 6 0 0 0   9 1.38 1.38 20.7 0.36 0.29 5.3 69 1 1 1 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.