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PDBsum entry 4jlt

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Tunnel analysis for: 4jlt calculated with MOLE 2.0 PDB id
4jlt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.49 43.7 0.42 -0.01 8.1 86 2 1 4 7 4 1 1  HEM 501 A 8PR 505 A
2 1.28 1.30 47.4 0.44 0.18 10.0 79 2 2 2 8 5 2 1  HEM 501 A 8PR 505 A
3 2.40 4.22 19.6 1.43 0.81 10.7 67 2 0 1 3 5 0 1  CM5 502 A PO4 512 A
4 1.75 2.79 21.2 1.37 0.65 7.8 70 2 0 2 2 6 0 1  CM5 502 A PO4 512 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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