PDBsum entry 4jkp Go to PDB code:  Tunnel analysis for: 4jkp calculated with MOLE 2.0 PDB id 4jkp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 2.14 20.9 -0.93 -0.42 18.6 90 2 1 1 2 0 0 0   2 1.09 1.09 41.2 -0.25 -0.45 6.0 84 2 0 4 4 2 1 0   3 1.35 1.48 20.1 -0.36 -0.10 7.2 69 0 1 2 1 1 2 1   4 1.15 1.50 21.4 0.28 0.24 4.5 71 0 1 1 2 2 1 1   5 1.13 2.08 25.4 -0.30 -0.17 14.0 91 1 2 2 3 1 0 0   6 1.65 1.77 16.4 -0.30 -0.57 2.5 94 0 0 4 2 1 0 0   7 1.61 1.73 22.1 -0.58 -0.66 2.2 98 0 0 7 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.