spacer
spacer

PDBsum entry 4jkh

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4jkh calculated with MOLE 2.0 PDB id
4jkh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 1.79 41.5 -0.95 -0.30 17.6 83 7 4 6 10 2 2 0  GOL 2004 A
2 1.09 1.44 51.1 -0.48 -0.32 9.8 82 7 4 9 14 2 4 0  GOL 2004 A
3 1.53 1.80 58.1 -1.28 -0.35 21.7 81 9 6 5 7 3 2 0  GOL 2004 A
4 1.55 1.81 67.4 -1.14 -0.36 19.6 82 8 8 5 10 2 3 0  GOL 2004 A
5 1.51 2.21 68.4 -1.48 -0.36 21.4 88 4 8 13 7 3 1 0  MG 2002 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer