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PDBsum entry 4jk1
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Transcription, transferase
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PDB id
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4jk1
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Contents |
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323 a.a.
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221 a.a.
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1335 a.a.
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1160 a.a.
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90 a.a.
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517 a.a.
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76 a.a.
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458 a.a.
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Generate full PROCHECK analyses
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PROCHECK summary for 4jk1
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 4840 76.8%**
Additional allowed regions [a,b,l,p] 1172 18.6%
Generously allowed regions [~a,~b,~l,~p] 165 2.6%
Disallowed regions [XX] 127 2.0%*
---- ------
Non-glycine and non-proline residues 6304 100.0%
End-residues (excl. Gly and Pro) 35
Glycine residues 501
Proline residues 281
----
Total number of residues 7121
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.69*
Chi1-chi2 distribution -0.34
Chi1 only -0.01
Chi3 & chi4 0.58
Omega 0.20
-0.14
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.70
Main-chain bond angles 0.66
0.68
=====
OVERALL AVERAGE 0.17
=====
G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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