spacer
spacer

PDBsum entry 4jgo

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4jgo calculated with MOLE 2.0 PDB id
4jgo
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.76 2.31 52.3 -2.26 -0.52 25.0 80 6 5 5 6 2 0 0  MSE 70 B GOL 302 B GOL 304 B
2 1.45 1.85 75.2 -2.37 -0.46 22.9 84 6 6 6 1 3 0 0  MSE 70 A GOL 302 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer