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PDBsum entry 4jax
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Pore analysis for: 4jax calculated with  MOLE 2.0
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PDB id
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4jax
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.18 |
3.41 |
32.2 |
-2.61 |
-0.85 |
26.8 |
89 |
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4 |
6 |
4 |
0 |
0 |
1 |
0 |
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PO4 503 A PO4 504 A
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2 |
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1.87 |
2.10 |
39.3 |
-1.92 |
-0.61 |
14.4 |
82 |
3 |
2 |
4 |
2 |
0 |
1 |
0 |
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3 |
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3.21 |
4.03 |
43.2 |
-2.34 |
-0.74 |
20.2 |
85 |
5 |
3 |
7 |
1 |
0 |
2 |
0 |
GOL 505 C
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4 |
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1.88 |
2.29 |
77.8 |
-1.90 |
-0.50 |
17.7 |
77 |
4 |
5 |
4 |
3 |
2 |
3 |
0 |
PO4 501 A
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5 |
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2.02 |
2.86 |
88.3 |
-2.05 |
-0.63 |
22.0 |
81 |
8 |
7 |
7 |
3 |
0 |
4 |
0 |
PO4 501 A
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6 |
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1.92 |
2.04 |
117.0 |
-1.95 |
-0.64 |
20.3 |
82 |
9 |
9 |
10 |
5 |
0 |
4 |
0 |
PO4 501 A GOL 505 A
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7 |
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1.53 |
1.94 |
121.7 |
-1.60 |
-0.49 |
18.6 |
80 |
8 |
8 |
7 |
7 |
2 |
4 |
0 |
PO4 501 A GOL 505 A
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8 |
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3.12 |
4.13 |
136.4 |
-1.97 |
-0.64 |
22.8 |
84 |
11 |
10 |
11 |
2 |
1 |
3 |
0 |
PO4 501 D PO4 502 D
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9 |
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2.20 |
2.66 |
165.2 |
-2.21 |
-0.59 |
24.9 |
86 |
13 |
13 |
11 |
3 |
2 |
4 |
0 |
PO4 501 A GOL 505 A PO4 502 C PO4 503 C PO4 504 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program