PDBsum entry 4jaw Go to PDB code:  Tunnel analysis for: 4jaw calculated with MOLE 2.0 PDB id 4jaw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.27 24.1 -2.33 -0.34 18.8 80 4 5 3 0 2 0 0   2 1.30 1.31 18.3 -2.32 -0.34 14.3 81 3 3 3 0 2 0 0   3 1.25 1.25 20.6 -0.79 -0.38 15.3 79 2 2 3 2 0 0 2  GAL 701 B NGT 702 B 4 1.24 1.24 22.9 -1.18 -0.53 18.7 97 2 2 3 1 0 0 0   5 1.25 1.34 16.9 -0.09 -0.25 4.3 75 1 0 1 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.