PDBsum entry 4j9h Go to PDB code:  Tunnel analysis for: 4j9h calculated with MOLE 2.0 PDB id 4j9h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.43 2.70 18.5 -0.97 -0.05 2.9 68 1 0 2 0 3 4 0   2 2.52 2.58 19.3 -1.72 0.02 2.4 68 0 0 3 0 5 3 0   3 2.52 2.58 26.1 -2.05 -0.47 11.1 80 1 2 4 0 2 2 0   4 2.06 2.22 30.0 -1.49 -0.27 6.9 70 2 0 3 0 3 5 0   5 2.51 2.59 36.7 -1.58 -0.35 4.8 70 0 2 4 0 3 7 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.