PDBsum entry 4j7c Go to PDB code:  Pore analysis for: 4j7c calculated with MOLE 2.0 PDB id 4j7c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.84 2.66 40.7 -1.92 -0.29 24.5 81 5 5 4 3 1 0 0   2 2.62 2.72 46.3 -2.19 -0.51 22.0 84 9 0 2 0 1 0 0   3 2.38 2.46 58.6 -0.60 -0.12 10.3 83 2 3 4 9 3 1 0   4 2.89 2.89 60.7 -1.77 -0.42 17.0 87 8 4 8 4 1 3 0   5 2.68 2.68 61.3 -2.38 -0.44 30.6 81 8 4 2 1 2 0 0   6 3.72 4.93 77.7 -1.95 -0.37 22.8 85 8 9 8 5 2 3 0   7 1.43 2.61 79.5 -1.89 -0.29 21.5 79 9 6 4 7 3 4 0   8 1.49 2.69 84.9 -1.90 -0.40 19.8 83 9 6 6 5 2 3 0   9 2.60 2.72 88.9 -2.15 -0.50 23.5 85 9 9 8 4 2 2 0   10 1.31 2.45 89.0 -2.21 -0.45 21.4 80 7 8 9 6 5 2 0   11 2.10 2.98 88.9 -2.86 -0.63 15.3 85 6 8 18 3 5 0 0   12 2.63 2.71 90.5 -2.66 -0.79 25.5 88 7 11 14 3 2 0 0   13 2.92 2.92 91.0 -2.81 -0.69 25.3 87 8 9 13 3 3 0 0   14 3.09 4.46 96.4 -2.57 -0.47 17.1 84 9 6 15 5 6 0 0  ATP 601 E ATP 301 F 15 3.05 4.46 99.2 -2.47 -0.50 16.0 85 6 8 17 7 6 0 0  ATP 601 A ATP 301 B ATP 601 C 16 1.93 3.06 104.8 -2.38 -0.49 25.1 82 8 12 11 6 5 2 0   17 3.38 5.75 108.0 -2.79 -0.57 28.9 85 8 13 13 4 4 0 0   18 1.22 1.33 112.7 -2.47 -0.44 32.8 80 13 11 5 6 2 0 0   19 3.39 5.15 117.3 -2.44 -0.45 25.9 84 12 10 11 4 3 2 0   20 3.34 5.74 118.9 -2.93 -0.72 27.8 87 10 12 16 3 3 0 0   21 2.61 2.86 123.4 -2.43 -0.40 28.7 83 11 14 9 5 4 2 0   22 2.58 2.73 125.0 -2.90 -0.65 31.2 85 9 16 14 4 4 0 0   23 3.49 4.72 125.7 -3.05 -0.77 30.5 89 10 15 18 2 2 0 0   24 3.06 4.45 126.7 -2.49 -0.45 19.3 85 11 10 19 7 6 2 0  ATP 601 E ATP 301 F 25 3.05 4.37 127.2 -2.44 -0.46 19.6 84 8 12 18 7 6 2 0  ATP 601 A ATP 301 B 26 2.89 2.92 131.8 -2.98 -0.71 32.9 87 9 18 16 3 3 0 0   27 2.29 3.03 141.9 -2.39 -0.42 19.3 83 12 11 19 9 8 0 0  ATP 601 E ATP 301 F ATP 601 G ATP 301 H 28 2.92 4.61 152.5 -2.39 -0.39 18.7 84 12 11 24 9 9 0 0  ATP 601 A ATP 301 B ATP 601 E ATP 301 F 29 2.64 2.72 154.9 -2.55 -0.60 21.6 87 13 13 24 6 5 0 0  ATP 601 E ATP 301 F 30 2.88 2.88 156.5 -2.65 -0.53 20.6 86 14 13 24 6 6 0 0  ATP 601 E ATP 301 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.