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PDBsum entry 4j4y
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Pore analysis for: 4j4y calculated with  MOLE 2.0
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PDB id
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4j4y
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.12 |
5.15 |
28.8 |
-1.59 |
-0.73 |
18.3 |
85 |
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2 |
3 |
3 |
1 |
0 |
1 |
0 |
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2 |
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2.31 |
2.47 |
30.8 |
-0.83 |
-0.35 |
16.4 |
81 |
2 |
2 |
2 |
1 |
0 |
2 |
0 |
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3 |
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2.58 |
2.71 |
44.0 |
-1.97 |
-0.72 |
17.1 |
80 |
4 |
2 |
3 |
1 |
0 |
2 |
0 |
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4 |
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3.03 |
3.08 |
44.8 |
-2.01 |
-0.63 |
16.6 |
84 |
4 |
3 |
5 |
1 |
1 |
3 |
0 |
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5 |
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2.63 |
2.74 |
47.6 |
-1.11 |
-0.54 |
9.5 |
85 |
3 |
2 |
5 |
2 |
1 |
3 |
0 |
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6 |
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2.42 |
2.96 |
68.6 |
-1.86 |
-0.72 |
21.3 |
83 |
4 |
8 |
5 |
1 |
1 |
2 |
0 |
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7 |
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2.04 |
2.36 |
76.1 |
-2.21 |
-0.54 |
19.5 |
84 |
7 |
3 |
6 |
3 |
2 |
1 |
0 |
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8 |
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2.01 |
2.36 |
79.2 |
-1.84 |
-0.47 |
16.7 |
82 |
8 |
2 |
3 |
3 |
1 |
2 |
0 |
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9 |
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2.66 |
2.73 |
102.6 |
-1.63 |
-0.59 |
14.8 |
88 |
9 |
2 |
9 |
5 |
1 |
3 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program