PDBsum entry 4iyo Go to PDB code:  Tunnel analysis for: 4iyo calculated with MOLE 2.0 PDB id 4iyo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 3.08 28.2 -1.32 -0.16 13.4 82 2 4 3 2 3 0 0  LLP 210 B SER 401 B NAK 402 B 2 1.24 3.15 28.3 -1.26 -0.26 15.4 84 1 4 4 2 3 0 0  LLP 210 C SER 401 C NAK 402 C 3 1.08 1.97 31.2 -1.49 -0.22 18.1 77 4 1 1 4 1 4 0   4 1.32 1.32 29.8 -1.06 -0.27 11.6 82 1 4 3 2 3 0 0  LLP 210 D SER 401 D SER 402 D 5 1.31 1.45 22.2 -1.21 -0.25 21.6 88 4 2 2 3 0 1 0   6 1.31 1.45 23.6 -1.22 -0.24 22.3 85 4 3 2 3 1 1 0   7 1.29 1.29 30.8 -1.37 -0.34 16.3 84 3 4 3 2 2 0 0  SER 401 A 0JO 404 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.