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PDBsum entry 4imt

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4imt calculated with MOLE 2.0 PDB id
4imt
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.94 2.37 30.9 -2.18 0.14 19.1 75 4 2 4 3 3 1 0  HEM 801 B 1EW 804 B
2 2.16 2.16 45.9 -0.66 0.15 12.2 79 2 2 7 8 4 0 1  HEM 801 B ACT 803 B 1EW 804 B
3 1.20 1.20 52.7 -0.56 0.02 9.4 77 3 2 5 6 4 1 0  HEM 801 A 1EW 803 A
4 2.07 2.08 57.8 -0.48 0.05 12.7 81 4 2 5 8 5 0 1  HEM 801 A 1EW 803 A ACT 804 A
5 1.46 1.56 59.6 -1.73 -0.44 20.5 76 5 6 3 4 2 2 2  
6 1.45 1.57 60.2 -1.25 -0.38 16.5 75 4 5 3 4 1 2 2  
7 1.31 1.39 66.2 -2.13 -0.70 21.4 84 5 6 5 1 1 1 0  
8 1.17 1.15 84.9 -0.54 -0.02 9.6 82 3 2 11 11 6 0 1  HEM 801 A 1EW 803 A ACT 804 A
9 1.18 1.18 90.2 -0.62 -0.14 13.1 73 5 3 6 9 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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