 |
PDBsum entry 4ifh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4ifh calculated with MOLE 2.0
|
PDB id
|
|
|
|
4ifh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
12 tunnels,
coloured by tunnel radius |
 |
12 tunnels,
coloured by
tunnel radius
|
12 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.14 |
1.12 |
60.1 |
-0.30 |
-0.01 |
9.6 |
80 |
 |
5 |
1 |
7 |
10 |
3 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.13 |
1.12 |
63.1 |
-0.80 |
-0.21 |
13.6 |
85 |
5 |
6 |
6 |
10 |
3 |
0 |
0 |
|
 |
3 |
 |
1.14 |
1.12 |
72.8 |
-1.25 |
-0.20 |
17.4 |
80 |
9 |
3 |
6 |
11 |
3 |
1 |
0 |
|
 |
4 |
 |
1.14 |
1.12 |
74.2 |
-0.83 |
-0.22 |
11.8 |
87 |
7 |
1 |
10 |
12 |
2 |
0 |
0 |
|
 |
5 |
 |
1.14 |
1.12 |
76.6 |
-0.27 |
-0.08 |
11.0 |
81 |
6 |
5 |
6 |
13 |
4 |
1 |
0 |
|
 |
6 |
 |
1.15 |
1.13 |
78.6 |
-0.86 |
-0.09 |
15.5 |
79 |
8 |
6 |
7 |
10 |
6 |
0 |
0 |
|
 |
7 |
 |
1.12 |
1.13 |
84.2 |
-0.59 |
-0.14 |
13.4 |
80 |
8 |
6 |
8 |
10 |
6 |
0 |
0 |
|
 |
8 |
 |
1.14 |
1.13 |
85.7 |
-0.58 |
-0.11 |
10.3 |
84 |
7 |
4 |
12 |
9 |
5 |
0 |
0 |
|
 |
9 |
 |
1.12 |
1.12 |
89.0 |
-0.49 |
-0.08 |
10.6 |
81 |
7 |
2 |
9 |
10 |
6 |
1 |
0 |
|
 |
10 |
 |
1.13 |
1.12 |
89.2 |
0.02 |
0.03 |
7.1 |
82 |
4 |
2 |
8 |
15 |
7 |
3 |
0 |
|
 |
11 |
 |
1.13 |
1.13 |
94.3 |
-0.56 |
-0.07 |
13.9 |
79 |
9 |
5 |
7 |
14 |
4 |
2 |
0 |
|
 |
12 |
 |
1.12 |
1.12 |
99.0 |
-0.16 |
0.08 |
12.3 |
77 |
8 |
6 |
8 |
19 |
5 |
2 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |