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PDBsum entry 4ibi

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ibi calculated with MOLE 2.0 PDB id
4ibi
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.47 1.46 17.3 0.78 -0.06 4.2 93 2 0 3 5 0 1 0  
2 1.48 1.49 17.8 -0.46 -0.15 8.0 85 2 0 1 4 0 1 0  1D8 401 A
3 1.47 1.46 25.9 1.54 0.13 1.2 92 0 0 2 9 0 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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