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PDBsum entry 4ibc
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Tunnel analysis for: 4ibc calculated with  MOLE 2.0
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PDB id
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4ibc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.26 |
2.26 |
16.1 |
1.61 |
0.25 |
1.1 |
89 |
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0 |
0 |
2 |
7 |
0 |
2 |
0 |
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2 |
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1.93 |
3.06 |
20.4 |
0.00 |
0.05 |
9.4 |
83 |
2 |
0 |
1 |
6 |
0 |
3 |
0 |
12G 401 A
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3 |
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2.12 |
2.38 |
21.0 |
1.36 |
0.11 |
1.2 |
91 |
0 |
0 |
2 |
9 |
0 |
3 |
0 |
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4 |
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1.94 |
2.49 |
23.3 |
0.18 |
0.09 |
7.8 |
83 |
2 |
0 |
2 |
6 |
0 |
3 |
0 |
12G 401 A
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5 |
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1.86 |
3.00 |
24.2 |
-0.25 |
-0.15 |
7.7 |
82 |
2 |
0 |
1 |
7 |
0 |
3 |
0 |
DMS 402 A 12G 401 B
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6 |
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2.17 |
2.17 |
25.3 |
1.30 |
0.10 |
1.7 |
85 |
0 |
1 |
0 |
8 |
0 |
4 |
0 |
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7 |
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2.10 |
2.36 |
31.7 |
0.74 |
-0.07 |
4.5 |
87 |
1 |
1 |
2 |
9 |
0 |
3 |
0 |
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8 |
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1.24 |
1.31 |
19.6 |
1.96 |
0.49 |
4.1 |
89 |
1 |
0 |
0 |
7 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program