 |
PDBsum entry 4hzb
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4hzb calculated with MOLE 2.0
|
PDB id
|
|
|
|
4hzb
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
25 tunnels,
coloured by tunnel radius |
 |
24 tunnels,
coloured by
tunnel radius
|
24 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.50 |
1.51 |
26.6 |
-1.44 |
-0.45 |
13.4 |
82 |
 |
2 |
2 |
4 |
2 |
2 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.32 |
2.31 |
30.6 |
-2.22 |
-0.38 |
20.1 |
75 |
4 |
3 |
2 |
1 |
3 |
2 |
0 |
|
 |
3 |
 |
1.72 |
1.77 |
31.9 |
-1.58 |
-0.45 |
16.6 |
86 |
3 |
2 |
5 |
2 |
0 |
4 |
0 |
|
 |
4 |
 |
1.33 |
2.31 |
33.4 |
-2.41 |
-0.25 |
22.7 |
72 |
4 |
3 |
2 |
1 |
4 |
1 |
0 |
|
 |
5 |
 |
1.77 |
1.83 |
33.5 |
-1.42 |
-0.49 |
12.5 |
86 |
4 |
2 |
5 |
2 |
0 |
4 |
0 |
|
 |
6 |
 |
1.63 |
1.90 |
33.9 |
-1.17 |
-0.40 |
12.7 |
85 |
4 |
3 |
5 |
3 |
2 |
2 |
0 |
|
 |
7 |
 |
1.67 |
1.67 |
35.2 |
-2.18 |
-0.55 |
20.8 |
90 |
5 |
4 |
5 |
2 |
0 |
1 |
0 |
|
 |
8 |
 |
1.74 |
1.79 |
35.8 |
-1.98 |
-0.34 |
18.0 |
81 |
4 |
2 |
5 |
2 |
2 |
3 |
0 |
|
 |
9 |
 |
1.72 |
1.77 |
37.1 |
-1.69 |
-0.35 |
14.2 |
81 |
5 |
2 |
5 |
2 |
2 |
3 |
0 |
|
 |
10 |
 |
1.41 |
1.48 |
38.2 |
-1.45 |
-0.47 |
12.6 |
81 |
5 |
0 |
4 |
2 |
1 |
4 |
0 |
|
 |
11 |
 |
1.47 |
1.50 |
38.4 |
-1.38 |
-0.52 |
13.7 |
82 |
4 |
0 |
4 |
2 |
1 |
3 |
0 |
|
 |
12 |
 |
1.33 |
2.32 |
40.1 |
-2.37 |
-0.44 |
22.3 |
78 |
6 |
5 |
3 |
2 |
4 |
1 |
0 |
|
 |
13 |
 |
1.36 |
1.38 |
42.6 |
-1.57 |
-0.33 |
14.1 |
77 |
6 |
0 |
4 |
2 |
3 |
3 |
0 |
|
 |
14 |
 |
1.46 |
1.47 |
42.9 |
-1.53 |
-0.42 |
14.9 |
78 |
5 |
0 |
4 |
2 |
3 |
2 |
0 |
|
 |
15 |
 |
1.72 |
2.59 |
43.0 |
-2.19 |
-0.55 |
22.9 |
85 |
6 |
5 |
5 |
2 |
1 |
2 |
0 |
|
 |
16 |
 |
1.45 |
1.45 |
46.7 |
-1.90 |
-0.57 |
17.7 |
87 |
7 |
2 |
6 |
2 |
1 |
1 |
0 |
|
 |
17 |
 |
1.33 |
2.32 |
48.7 |
-1.84 |
-0.40 |
14.8 |
76 |
5 |
3 |
3 |
3 |
3 |
5 |
0 |
|
 |
18 |
 |
1.33 |
2.32 |
51.3 |
-2.71 |
-0.49 |
24.9 |
79 |
7 |
6 |
3 |
2 |
3 |
1 |
0 |
|
 |
19 |
 |
1.46 |
1.47 |
51.7 |
-1.17 |
-0.50 |
10.5 |
83 |
5 |
0 |
6 |
3 |
1 |
5 |
0 |
|
 |
20 |
 |
1.33 |
2.31 |
52.6 |
-2.05 |
-0.31 |
15.5 |
74 |
6 |
3 |
3 |
3 |
5 |
4 |
0 |
|
 |
21 |
 |
1.35 |
1.37 |
52.9 |
-1.30 |
-0.46 |
11.3 |
82 |
5 |
0 |
6 |
3 |
1 |
6 |
0 |
|
 |
22 |
 |
1.44 |
1.44 |
55.3 |
-1.37 |
-0.41 |
11.5 |
79 |
6 |
0 |
6 |
3 |
3 |
4 |
0 |
|
 |
23 |
 |
1.37 |
1.38 |
55.6 |
-2.01 |
-0.54 |
19.5 |
85 |
9 |
3 |
6 |
2 |
1 |
2 |
0 |
|
 |
24 |
 |
1.39 |
1.47 |
56.8 |
-1.49 |
-0.37 |
12.2 |
79 |
6 |
0 |
6 |
3 |
3 |
5 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |