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PDBsum entry 4hef

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Hydrolase/hydrolase inhibitor PDB id
4hef
Contents
Protein chain
360 a.a.
Ligands
GOL ×2
NXL
Waters ×341

References listed in PDB file
Key reference
Title Structural insight into potent broad-Spectrum inhibition with reversible recyclization mechanism: avibactam in complex with ctx-M-15 and pseudomonas aeruginosa ampc β-Lactamases.
Authors S.D.Lahiri, S.Mangani, T.Durand-Reville, M.Benvenuti, F.De luca, G.Sanyal, J.D.Docquier.
Ref. Antimicrob Agents Chemother, 2013, 57, 2496-2505. [DOI no: 10.1128/AAC.02247-12]
PubMed id 23439634
Abstract
Although β-lactams have been the most effective class of antibacterial agents used in clinical practice for the past half century, their effectiveness on Gram-negative bacteria has been eroded due to the emergence and spread of β-lactamase enzymes that are not affected by currently marketed β-lactam/β-lactamase inhibitor combinations. Avibactam is a novel, covalent, non-β-lactam β-lactamase inhibitor presently in clinical development in combination with either ceftaroline or ceftazidime. In vitro studies show that avibactam may restore the broad-spectrum activity of cephalosporins against class A, class C, and some class D β-lactamases. Here we describe the structures of two clinically important β-lactamase enzymes bound to avibactam, the class A CTX-M-15 extended-spectrum β-lactamase and the class C Pseudomonas aeruginosa AmpC β-lactamase, which together provide insight into the binding modes for the respective enzyme classes. The structures reveal similar binding modes in both enzymes and thus provide a rationale for the broad-spectrum inhibitory activity of avibactam. Identification of the key residues surrounding the binding pocket allows for a better understanding of the potency of this scaffold. Finally, avibactam has recently been shown to be a reversible inhibitor, and the structures provide insights into the mechanism of avibactam recyclization. Analysis of the ultra-high-resolution CTX-M-15 structure suggests how the deacylation mechanism favors recyclization over hydrolysis.
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