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PDBsum entry 4fid
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Pore analysis for: 4fid calculated with  MOLE 2.0
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PDB id
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4fid
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.87 |
2.08 |
33.0 |
-2.23 |
-0.51 |
26.2 |
75 |
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6 |
5 |
2 |
1 |
2 |
0 |
0 |
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MSE 217 A
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2 |
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1.30 |
1.45 |
56.2 |
-0.80 |
-0.39 |
13.3 |
88 |
3 |
2 |
2 |
5 |
0 |
0 |
0 |
MSE 239 A MSE 345 A MSE 348 A MSE 354 A
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3 |
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1.76 |
1.77 |
58.1 |
-1.96 |
-0.59 |
19.1 |
85 |
7 |
6 |
4 |
1 |
0 |
3 |
0 |
GDP 401 A
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4 |
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1.91 |
2.13 |
61.0 |
-1.68 |
-0.41 |
17.5 |
78 |
6 |
2 |
3 |
2 |
2 |
1 |
0 |
MSE 149 B
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5 |
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1.76 |
1.77 |
62.3 |
-2.29 |
-0.56 |
21.5 |
85 |
8 |
4 |
5 |
0 |
1 |
3 |
0 |
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6 |
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1.84 |
2.05 |
76.9 |
-1.69 |
-0.61 |
18.8 |
81 |
9 |
4 |
3 |
3 |
1 |
1 |
0 |
GDP 401 A MSE 149 B
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7 |
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1.78 |
1.76 |
82.8 |
-2.08 |
-0.66 |
21.8 |
85 |
10 |
11 |
5 |
3 |
0 |
3 |
0 |
GDP 401 A MSE 217 B
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8 |
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1.28 |
1.41 |
221.7 |
-1.64 |
-0.54 |
18.9 |
84 |
10 |
10 |
10 |
6 |
2 |
4 |
0 |
MSE 149 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program