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PDBsum entry 4f8h
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Pore analysis for: 4f8h calculated with  MOLE 2.0
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PDB id
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4f8h
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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19 pores,
coloured by radius
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19 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.44 |
2.61 |
25.1 |
0.53 |
0.49 |
6.5 |
81 |
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1 |
1 |
1 |
5 |
3 |
1 |
0 |
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PC1 403 E
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2 |
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1.41 |
2.23 |
25.4 |
0.40 |
0.38 |
6.2 |
87 |
1 |
1 |
1 |
5 |
1 |
1 |
0 |
LMD 402 B
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3 |
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1.37 |
1.60 |
26.2 |
-0.43 |
-0.19 |
13.3 |
76 |
1 |
4 |
1 |
2 |
3 |
1 |
0 |
LMD 402 A
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4 |
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2.36 |
3.75 |
35.0 |
1.49 |
0.24 |
3.5 |
102 |
0 |
4 |
5 |
15 |
0 |
0 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
LMD 402 E
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5 |
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2.36 |
3.66 |
43.1 |
0.48 |
-0.07 |
11.7 |
101 |
0 |
5 |
5 |
15 |
0 |
0 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
LMD 402 E
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6 |
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1.31 |
1.53 |
43.4 |
-1.07 |
-0.33 |
17.6 |
79 |
2 |
4 |
2 |
3 |
3 |
1 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
LMD 402 E
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7 |
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1.34 |
1.58 |
49.5 |
-0.98 |
-0.34 |
17.0 |
82 |
2 |
4 |
3 |
6 |
3 |
0 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
RKE 401 E LMD 402 E
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8 |
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1.37 |
1.65 |
61.3 |
-0.13 |
-0.07 |
11.2 |
89 |
2 |
3 |
3 |
12 |
3 |
1 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
LMD 402 E
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9 |
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1.38 |
1.60 |
74.3 |
-0.53 |
-0.23 |
12.8 |
79 |
2 |
5 |
5 |
6 |
6 |
1 |
0 |
LMD 402 D RKE 401 E LMD 402 E
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10 |
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1.37 |
1.52 |
80.6 |
-0.83 |
-0.08 |
15.6 |
80 |
3 |
6 |
3 |
10 |
6 |
1 |
0 |
LMD 402 A RKE 401 E LMD 402 E
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11 |
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1.31 |
1.53 |
98.2 |
-1.31 |
-0.34 |
21.2 |
79 |
7 |
8 |
4 |
5 |
6 |
2 |
0 |
LMD 402 A LMD 402 B LMD 402 C LMD 405 C LMD 402 D
LMD 402 E
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12 |
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1.33 |
1.51 |
103.8 |
-1.08 |
-0.28 |
19.7 |
79 |
7 |
9 |
4 |
7 |
7 |
1 |
0 |
LMD 402 A LMD 402 B LMD 402 C RKE 401 E LMD 402 E
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13 |
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1.47 |
1.64 |
108.7 |
-1.12 |
-0.48 |
18.2 |
83 |
4 |
9 |
2 |
6 |
2 |
4 |
0 |
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14 |
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1.38 |
1.54 |
114.2 |
-2.02 |
-0.68 |
27.2 |
83 |
5 |
17 |
4 |
7 |
2 |
4 |
0 |
LMD 402 A
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15 |
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1.14 |
1.29 |
120.0 |
-1.77 |
-0.59 |
25.1 |
87 |
6 |
12 |
4 |
8 |
2 |
1 |
0 |
LMD 402 A
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16 |
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1.29 |
2.06 |
138.9 |
-1.41 |
-0.58 |
22.9 |
86 |
4 |
12 |
4 |
8 |
2 |
3 |
0 |
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17 |
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1.33 |
1.53 |
148.5 |
-1.82 |
-0.55 |
26.5 |
80 |
4 |
21 |
4 |
10 |
5 |
3 |
0 |
LMD 402 A RKE 401 E LMD 402 E
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18 |
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1.29 |
1.44 |
163.2 |
-1.38 |
-0.54 |
24.4 |
84 |
5 |
14 |
2 |
10 |
2 |
4 |
0 |
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19 |
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1.36 |
1.52 |
173.4 |
-2.11 |
-0.60 |
28.7 |
82 |
9 |
22 |
6 |
7 |
5 |
4 |
0 |
LMD 402 A LMD 402 B LMD 402 C PC1 403 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program