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PDBsum entry 4f6e

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4f6e calculated with MOLE 2.0 PDB id
4f6e
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.21 4.58 26.2 -2.27 -0.69 15.6 88 0 4 6 1 1 1 0  MLY 72 A MLY 72 B MLY 72 C MLY 124 C MLY 72 D
2 3.18 4.30 28.3 -2.26 -0.60 15.9 87 0 4 4 3 1 1 0  MLY 124 A MLY 72 B MLY 72 C MLY 72 D
3 3.58 3.98 32.0 -1.76 -0.71 8.5 87 0 2 5 2 2 1 0  MLY 72 B MLY 72 D MLY 124 D
4 3.13 4.57 38.8 -1.77 -0.72 7.6 84 0 2 6 4 2 2 0  MLY 124 A MLY 72 C MLY 124 C
5 1.44 2.66 42.4 -1.52 -0.50 15.1 86 0 8 7 4 2 0 0  MLY 145 A MLY 72 B MLY 72 C MLY 145 C MLY 72 D
6 1.52 3.10 44.4 -1.45 -0.61 9.5 89 0 5 8 3 0 1 0  MLY 145 A MLY 124 C MLY 145 C
7 1.44 2.66 46.5 -1.34 -0.54 8.1 91 0 4 8 6 0 1 0  MLY 124 A MLY 145 A MLY 145 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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