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PDBsum entry 4f0x

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Pore analysis for: 4f0x calculated with MOLE 2.0 PDB id
4f0x
Pores calculated on whole structure Pores calculated excluding ligands

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39 pores, coloured by radius 38 pores, coloured by radius 38 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.11 3.61 43.9 -0.59 0.49 9.9 65 2 1 3 5 4 1 2  
2 1.49 1.50 58.9 -1.12 -0.39 17.3 82 8 3 7 4 3 0 0  
3 2.23 2.43 70.6 -2.38 -0.35 33.0 83 15 4 5 5 1 0 0  
4 1.86 2.11 86.9 -0.92 0.27 12.0 71 5 3 6 5 4 3 2  
5 1.55 2.22 92.0 -1.57 -0.33 24.6 84 15 6 7 7 3 0 0  
6 1.25 1.79 126.4 -1.85 -0.39 25.6 82 15 7 7 6 4 2 0  
7 1.32 2.57 144.8 -1.40 -0.58 16.2 85 14 6 10 7 1 2 0  0OR 501 D
8 1.38 1.38 259.7 -1.61 -0.46 19.9 81 19 14 14 12 6 2 0  
9 1.58 1.80 32.9 -0.54 -0.33 15.8 87 2 2 2 4 2 0 0  
10 2.02 2.30 36.1 -1.45 -0.31 18.7 75 6 1 3 5 1 1 0  
11 1.76 1.83 41.4 -1.24 -0.42 14.3 78 5 0 5 4 2 1 0  
12 1.50 1.51 41.3 -1.87 -0.30 23.3 83 6 2 2 1 1 1 0  
13 1.52 1.53 43.1 -0.86 -0.29 18.0 80 5 2 1 4 1 1 0  
14 1.52 1.53 44.3 -0.88 -0.41 14.2 83 5 2 3 2 2 1 0  
15 1.51 1.52 44.5 -1.49 -0.36 17.1 79 5 1 4 4 2 2 0  
16 1.20 1.44 51.4 -1.79 -0.26 21.1 82 6 1 5 5 2 0 0  
17 1.52 1.53 53.0 -0.63 -0.07 15.6 83 7 2 1 2 2 1 0  
18 1.67 1.83 58.2 -1.70 -0.22 27.4 84 7 3 3 3 2 0 0  
19 1.65 1.86 64.0 -1.47 -0.25 24.8 81 10 4 2 5 2 0 0  
20 1.42 1.42 64.0 -1.62 -0.33 23.9 82 12 4 2 2 2 1 0  
21 1.66 1.83 65.3 -1.64 -0.25 23.3 81 9 3 5 6 3 1 0  
22 2.74 3.88 66.4 -3.13 -0.59 31.7 83 9 4 5 2 1 0 0  
23 1.97 1.97 67.6 -2.43 -0.37 32.9 83 12 4 4 3 2 0 0  
24 2.02 2.02 73.3 -1.87 -0.34 28.6 81 14 5 3 6 2 0 0  
25 1.92 1.92 74.8 -2.18 -0.38 27.4 81 14 4 6 6 3 1 0  
26 1.17 1.82 76.1 -1.18 -0.49 13.9 83 4 4 6 4 2 2 0  0OR 501 E
27 1.18 1.80 84.3 -1.54 -0.59 16.3 85 6 5 9 3 2 2 0  0OR 501 E
28 1.38 1.66 86.9 -1.18 -0.42 10.8 76 6 3 3 3 2 5 0  
29 1.42 1.42 110.1 -1.21 -0.30 16.1 77 13 4 2 4 3 6 0  
30 1.43 1.65 113.7 -1.78 -0.31 22.4 78 13 4 4 5 3 5 0  
31 1.39 1.68 120.9 -1.71 -0.32 20.3 77 15 4 6 8 4 6 0  
32 1.61 1.75 124.7 -1.69 -0.53 17.3 82 6 5 6 3 1 5 0  
33 1.53 1.54 124.4 -1.80 -0.40 21.8 81 14 5 8 7 2 5 0  
34 1.25 2.02 31.8 -0.77 -0.44 6.5 85 1 1 5 3 1 2 0  0OR 501 B
35 1.22 1.84 33.6 -1.39 -0.60 10.0 88 4 1 5 2 1 1 0  0OR 501 B
36 2.08 2.33 50.0 -1.70 -0.35 24.3 75 8 3 3 3 2 0 0  
37 2.02 2.02 67.1 -2.31 -0.29 30.6 81 11 4 4 5 2 1 0  
38 1.83 2.55 73.9 -2.02 -0.31 28.6 79 15 6 4 7 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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