 |
PDBsum entry 4ewp
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4ewp calculated with MOLE 2.0
|
PDB id
|
|
|
|
4ewp
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
17 tunnels,
coloured by tunnel radius |
 |
17 tunnels,
coloured by
tunnel radius
|
17 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.14 |
1.14 |
35.6 |
-0.16 |
-0.15 |
7.9 |
90 |
 |
3 |
1 |
5 |
10 |
0 |
1 |
1 |
 |
|
 |
 |
2 |
 |
1.14 |
1.14 |
37.2 |
0.46 |
-0.01 |
6.7 |
80 |
2 |
2 |
2 |
10 |
2 |
2 |
0 |
|
 |
3 |
 |
1.13 |
1.13 |
47.8 |
-0.10 |
-0.28 |
5.4 |
87 |
2 |
2 |
4 |
11 |
1 |
1 |
0 |
|
 |
4 |
 |
1.19 |
1.66 |
88.4 |
0.25 |
-0.10 |
7.2 |
88 |
6 |
4 |
7 |
22 |
1 |
1 |
1 |
|
 |
5 |
 |
1.17 |
1.87 |
29.0 |
-0.70 |
-0.49 |
6.6 |
79 |
2 |
2 |
4 |
4 |
2 |
2 |
0 |
|
 |
6 |
 |
1.19 |
1.95 |
30.2 |
-0.71 |
-0.47 |
6.9 |
79 |
2 |
2 |
4 |
4 |
2 |
2 |
0 |
|
 |
7 |
 |
1.16 |
1.65 |
51.1 |
0.21 |
-0.19 |
4.4 |
91 |
2 |
1 |
8 |
12 |
0 |
1 |
1 |
|
 |
8 |
 |
1.24 |
1.66 |
52.4 |
0.25 |
-0.16 |
4.3 |
91 |
2 |
1 |
8 |
12 |
0 |
1 |
1 |
|
 |
9 |
 |
1.29 |
1.62 |
53.7 |
0.51 |
-0.03 |
5.0 |
89 |
3 |
1 |
8 |
12 |
2 |
0 |
1 |
|
 |
10 |
 |
1.34 |
2.56 |
54.0 |
0.08 |
-0.20 |
5.5 |
91 |
3 |
1 |
9 |
12 |
1 |
1 |
1 |
|
 |
11 |
 |
1.26 |
2.20 |
54.9 |
0.56 |
-0.04 |
4.4 |
89 |
3 |
1 |
8 |
12 |
2 |
0 |
1 |
|
 |
12 |
 |
1.28 |
1.62 |
55.2 |
0.08 |
-0.21 |
5.4 |
93 |
3 |
1 |
9 |
12 |
0 |
1 |
1 |
|
 |
13 |
 |
1.34 |
1.69 |
19.3 |
-1.92 |
-0.52 |
19.7 |
72 |
2 |
2 |
1 |
0 |
1 |
3 |
0 |
|
 |
14 |
 |
1.42 |
1.75 |
20.5 |
-2.16 |
-0.52 |
24.9 |
85 |
2 |
2 |
1 |
1 |
0 |
1 |
0 |
|
 |
15 |
 |
1.19 |
1.30 |
16.6 |
-2.03 |
-0.31 |
23.1 |
87 |
2 |
0 |
1 |
1 |
0 |
1 |
0 |
|
 |
16 |
 |
1.23 |
1.23 |
20.2 |
-0.83 |
-0.35 |
14.5 |
86 |
1 |
3 |
1 |
3 |
1 |
1 |
0 |
|
 |
17 |
 |
1.25 |
1.33 |
16.9 |
2.72 |
0.63 |
3.3 |
79 |
0 |
1 |
0 |
9 |
0 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |