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PDBsum entry 4em4

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4em4 calculated with MOLE 2.0 PDB id
4em4
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.74 2.22 31.6 -1.12 -0.20 13.5 83 6 2 4 5 2 1 1  FAD 501 A CA8 508 A
2 1.88 2.15 33.1 -2.42 -0.46 28.2 80 7 2 2 0 1 2 0  
3 1.68 2.32 37.8 -1.38 -0.31 15.8 84 5 3 6 5 3 1 1  FAD 501 B CA8 506 B
4 1.69 1.72 39.3 -1.52 -0.34 15.9 80 5 2 3 3 3 1 1  FAD 501 B
5 1.73 2.22 41.6 -1.71 -0.22 17.8 79 8 1 3 4 3 2 1  FAD 501 A CA8 508 A
6 1.86 2.00 41.8 -1.73 -0.44 18.1 82 5 3 4 3 3 1 1  FAD 501 A
7 1.70 2.31 46.3 -1.76 -0.25 17.9 79 7 1 4 4 4 2 1  FAD 501 B CA8 506 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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