spacer
spacer

PDBsum entry 4elm

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4elm calculated with MOLE 2.0 PDB id
4elm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 2.01 34.1 1.23 0.64 3.3 70 1 0 4 6 6 0 1  PLM 508 C
2 1.28 1.86 35.4 -0.24 0.31 9.2 70 1 2 4 5 7 0 0  SGF 507 C PLM 508 C
3 1.09 2.64 51.6 1.28 0.75 3.3 72 2 0 3 13 7 1 0  SGF 507 C PLM 508 C
4 1.26 1.26 16.6 1.62 0.51 1.5 79 0 0 0 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer