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PDBsum entry 4efb
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Tunnel analysis for: 4efb calculated with  MOLE 2.0
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PDB id
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4efb
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.56 |
1.93 |
17.2 |
-2.37 |
-0.16 |
20.8 |
75 |
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2 |
1 |
2 |
0 |
3 |
1 |
0 |
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NMN 403 A
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2 |
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1.56 |
1.92 |
19.7 |
-1.71 |
-0.25 |
17.8 |
76 |
2 |
1 |
2 |
1 |
3 |
2 |
0 |
NMN 403 A
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3 |
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1.51 |
1.83 |
23.2 |
-1.84 |
-0.52 |
17.4 |
86 |
4 |
1 |
3 |
1 |
0 |
1 |
0 |
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4 |
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1.53 |
1.83 |
23.3 |
-1.58 |
-0.46 |
16.9 |
84 |
4 |
1 |
2 |
2 |
0 |
1 |
0 |
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5 |
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1.52 |
1.83 |
25.6 |
-1.89 |
-0.45 |
17.1 |
84 |
4 |
0 |
3 |
1 |
0 |
2 |
0 |
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6 |
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1.50 |
1.84 |
25.7 |
-1.55 |
-0.39 |
16.4 |
82 |
4 |
0 |
2 |
2 |
0 |
2 |
0 |
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7 |
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1.30 |
1.30 |
25.0 |
-1.15 |
-0.14 |
15.4 |
76 |
4 |
2 |
2 |
3 |
2 |
0 |
0 |
0OW 404 A
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8 |
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1.33 |
1.33 |
26.6 |
-1.70 |
-0.21 |
23.2 |
76 |
5 |
3 |
1 |
4 |
2 |
0 |
0 |
SO4 401 A 0OW 404 A
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9 |
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1.36 |
1.36 |
30.6 |
-0.51 |
0.12 |
10.7 |
70 |
3 |
2 |
1 |
4 |
6 |
0 |
0 |
0OW 404 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program