 |
PDBsum entry 4ec4
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4ec4 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4ec4
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 tunnels,
coloured by tunnel radius |
|
8 tunnels,
coloured by
tunnel radius
|
8 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.19 |
1.20 |
16.3 |
-1.11 |
0.00 |
19.8 |
83 |
|
4 |
0 |
3 |
2 |
1 |
0 |
0 |
|
2PE 402 G
|
 |
|
2 |
 |
1.12 |
1.23 |
18.2 |
-0.32 |
0.01 |
15.9 |
89 |
3 |
2 |
2 |
1 |
1 |
0 |
0 |
|
|
3 |
 |
1.24 |
1.24 |
19.2 |
-1.88 |
-0.19 |
18.9 |
85 |
3 |
0 |
4 |
1 |
1 |
1 |
0 |
2PE 402 G
|
|
4 |
 |
1.17 |
1.41 |
19.2 |
-1.29 |
-0.12 |
26.3 |
88 |
4 |
2 |
2 |
2 |
1 |
0 |
0 |
|
|
5 |
 |
1.10 |
1.23 |
20.5 |
-0.51 |
0.02 |
17.2 |
90 |
3 |
0 |
3 |
2 |
1 |
0 |
0 |
|
|
6 |
 |
1.10 |
1.23 |
23.9 |
-1.66 |
-0.21 |
15.8 |
88 |
3 |
0 |
5 |
1 |
1 |
1 |
0 |
P33 403 J
|
|
7 |
 |
1.24 |
1.24 |
26.8 |
-1.41 |
0.32 |
10.9 |
70 |
3 |
0 |
3 |
1 |
5 |
3 |
0 |
0O6 402 B 2PE 402 G
|
 |
8 |
 |
1.10 |
1.23 |
37.1 |
-1.18 |
0.31 |
9.3 |
73 |
3 |
0 |
4 |
1 |
5 |
3 |
0 |
0O6 401 J P33 403 J
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program