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PDBsum entry 4e8h

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4e8h calculated with MOLE 2.0 PDB id
4e8h
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.11 2.70 25.1 -1.83 -0.40 25.5 83 5 2 2 1 0 0 0  
2 2.96 3.01 32.1 0.03 0.19 12.0 75 4 3 3 4 3 3 0  GSH 301 D
3 1.17 1.67 33.1 -1.37 -0.28 15.3 81 7 2 4 2 2 1 0  
4 1.85 2.02 34.8 -2.35 -0.86 21.1 88 3 5 5 0 0 1 0  
5 1.76 3.35 48.2 -2.06 -0.72 19.6 88 4 5 6 1 0 1 0  
6 1.85 2.03 50.9 -2.55 -0.82 25.0 85 6 7 5 0 0 1 0  
7 1.87 2.04 62.3 -2.28 -0.72 23.0 86 8 6 6 1 0 1 0  
8 3.11 4.88 26.2 0.10 0.38 13.3 78 3 1 3 4 3 1 0  GSH 301 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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