PDBsum entry 4e2s

Pore analysis for: 4e2s calculated with

MOLE 2.0

PDB id

4e2s

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

13 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.24

1.24

64.0

-1.12

-0.30

10.2

77

4

4

6

5

4

6

0

2

2.48

2.68

67.1

-1.39

-0.35

20.7

88

6

5

6

3

1

1

0

3

1.73

2.01

126.3

-1.25

-0.45

16.7

79

12

6

4

9

0

7

0

4

1.73

2.47

144.1

-1.09

-0.26

14.6

79

9

8

11

13

4

11

0

5

1.76

1.92

164.5

-1.78

-0.36

18.5

83

12

8

16

8

4

4

0

6

1.56

1.88

170.5

-1.74

-0.33

19.2

85

17

7

18

9

3

3

0

7

1.84

1.87

173.1

-1.14

-0.26

14.6

81

11

8

12

13

5

7

0

8

2.58

3.89

172.1

-1.86

-0.35

20.5

84

19

9

14

9

2

6

0

9

1.27

1.65

184.7

-1.35

-0.24

15.1

80

15

8

11

12

4

9

0

10

1.84

1.96

201.3

-1.23

-0.40

17.9

83

17

11

9

11

2

9

0

11

1.67

1.83

199.5

-1.12

-0.44

16.2

79

13

6

7

6

1

4

0

12

1.84

1.90

229.3

-1.33

-0.47

17.4

80

16

12

12

10

2

9

0

13

1.91

1.91

272.8

-1.32

-0.34

15.3

80

22

12

16

13

5

13

0

14

1.50

1.94

271.2

-1.26

-0.34

14.4

81

20

10

20

13

6

12

0

15

2.25

2.59

289.5

-1.03

-0.23

14.6

80

18

10

20

16

5

12

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.