spacer
spacer

PDBsum entry 4e1v

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Transferase PDB id
4e1v
Contents
Protein chains
(+ 3 more) 248 a.a.
Ligands
URF ×8
GOL ×5
EDO
Metals
__K ×3
Waters ×428

References listed in PDB file
Key reference
Title X-Ray structure of salmonella typhimurium uridine phosphorylase complexed with 5-Fluorouracil and molecular modelling of the complex of 5-Fluorouracil with uridine phosphorylase from vibrio cholerae.
Authors A.A.Lashkov, S.E.Sotnichenko, I.I.Prokofiev, A.G.Gabdulkhakov, I.I.Agapov, A.A.Shtil, C.Betzel, A.S.Mironov, A.M.Mikhailov.
Ref. Acta Crystallogr D Biol Crystallogr, 2012, 68, 968-974.
PubMed id 22868762
Abstract
Uridine phosphorylase (UPh), which is a key enzyme in the reutilization pathway of pyrimidine nucleoside metabolism, is a validated target for the treatment of infectious diseases and cancer. A detailed analysis of the interactions of UPh with the therapeutic ligand 5-fluorouracil (5-FUra) is important for the rational design of pharmacological inhibitors of these enzymes in prokaryotes and eukaryotes. Expanding on the preliminary analysis of the spatial organization of the active centre of UPh from the pathogenic bacterium Salmonella typhimurium (StUPh) in complex with 5-FUra [Lashkov et al. (2009), Acta Cryst. F65, 601-603], the X-ray structure of the StUPh-5-FUra complex was analysed at atomic resolution and an in silico model of the complex formed by the drug with UPh from Vibrio cholerae (VchUPh) was generated. These results should be considered in the design of selective inhibitors of UPhs from various species.
Secondary reference #1
Title Crystallization and preliminary X-Ray diffraction analysis of salmonella typhimurium uridine phosphorylase complexed with 5-Fluorouracil.
Authors A.A.Lashkov, A.G.Gabdoulkhakov, A.A.Shtil, A.M.Mikhailov.
Ref. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2009, 65, 601-603.
PubMed id 19478441
Abstract
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer