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PDBsum entry 4ds6
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Tunnel analysis for: 4ds6 calculated with  MOLE 2.0
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PDB id
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4ds6
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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13 tunnels,
coloured by tunnel radius |
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13 tunnels,
coloured by
tunnel radius
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13 tunnels,
coloured as in
list below
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Length
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Hydropathy
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Hydrophobicity
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Polarity
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Mutability
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
26.5 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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39 C A,40 C A,60 A A,61 A A,62 C A,63 A A,170 G A,
171 A A,195 U A,196 C A,242 G A
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2 |
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1.34 |
43.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
60 A A,61 A A,62 C A,63 A A,64 G A,65 U A,66 U A,
68 G A,69 C A,116 C A,117 G A,118 G A,119 C A,120
A A,170 G A,171 A A,172 U A,173 G A,194 G A,195 U
A,196 C A,240 A A,241 A A
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3 |
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1.32 |
47.1 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
46 G A,47 U A,60 A A,61 A A,62 C A,63 A A,64 G A,
116 C A,117 G A,118 G A,119 C A,120 A A,170 G A,
171 A A,172 U A,173 G A,187 A A,194 G A,195 U A,
196 C A,240 A A,241 A A
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4 |
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1.32 |
47.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
60 A A,61 A A,62 C A,63 A A,64 G A,121 A A,122 A
A,123 C A,124 C A,170 G A,171 A A,172 U A,194 G A,
195 U A,196 C A,234 U A,235 U A,238 U A,240 A A,
241 A A
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5 |
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1.32 |
48.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
45 U A,46 G A,60 A A,61 A A,62 C A,63 A A,64 G A,
65 U A,116 C A,117 G A,118 G A,119 C A,120 A A,
170 G A,171 A A,172 U A,173 G A,194 G A,195 U A,
196 C A,240 A A,241 A A
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6 |
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1.34 |
50.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
60 A A,61 A A,62 C A,63 A A,64 G A,121 A A,122 A
A,124 C A,125 U A,126 U A,170 G A,171 A A,172 U A,
194 G A,195 U A,196 C A,232 G A,233 A A,234 U A,
235 U A,238 U A,240 A A,241 A A
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7 |
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1.35 |
62.7 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
46 G A,47 U A,48 G A,53 C A,54 A A,60 A A,61 A A,
62 C A,63 A A,64 G A,118 G A,119 C A,120 A A,170
G A,171 A A,172 U A,173 G A,187 A A,188 A A,189 A
A,194 G A,195 U A,196 C A,210 U A,240 A A,241 A A
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8 |
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1.33 |
70.1 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
46 G A,47 U A,60 A A,61 A A,62 C A,63 A A,64 G A,
118 G A,119 C A,120 A A,168 U A,169 G A,170 G A,
171 A A,172 U A,173 G A,187 A A,188 A A,189 A A,
190 C A,191 A A,192 A A,193 A A,194 G A,195 U A,
196 C A,240 A A,241 A A
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9 |
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1.34 |
83.0 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
-5 G A,-4 U A,-
3 U A,46 G A,47 U A,60 A A,61 A A,62 C A,63 A A,
64 G A,118 G A,119 C A,120 A A,170 G A,171 A A,
172 U A,173 G A,174 A A,175 G A,176 U A,177 U A,
178 U A,179 G A,181 A A,183 A A,184 A A,185 C A,
186 A A,187 A A,190 C A,191 A A,194 G A,195 U A,
196 C A,223 A A,240 A A,241 A A,507 MG A
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10 |
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1.31 |
87.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
-4 U A,-
3 U A,46 G A,47 U A,60 A A,61 A A,62 C A,63 A A,
64 G A,72 A A,73 A A,74 C A,103 U A,104 G A,117 G
A,118 G A,119 C A,120 A A,170 G A,171 A A,172 U A,
173 G A,174 A A,185 C A,186 A A,187 A A,194 G A,
195 U A,196 C A,236 G A,240 A A,241 A A,369 G A,
514 MG A
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11 |
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1.83 |
9.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
269 G A,270 G A,271 U A,279 C A,280 A A,281 G A,
512 MG A
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12 |
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1.42 |
15.8 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
268 A A,269 G A,270 G A,280 A A,281 G A,282 A A,
298 U A
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13 |
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1.71 |
8.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
149 A A,150 U A,154 A A,226 G A,227 A A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program