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PDBsum entry 4dm9

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4dm9 calculated with MOLE 2.0 PDB id
4dm9
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.04 2.11 30.6 -0.55 -0.28 12.9 76 2 1 2 4 2 0 0  
2 1.46 3.90 35.3 -0.37 -0.43 8.6 69 2 1 1 1 0 1 2  
3 1.21 1.95 46.9 -0.27 -0.10 12.1 78 4 2 2 4 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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