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PDBsum entry 4dfu
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Tunnel analysis for: 4dfu calculated with  MOLE 2.0
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PDB id
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4dfu
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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14 tunnels,
coloured by tunnel radius |
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19 tunnels,
coloured by
tunnel radius
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19 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.02 |
2.02 |
23.9 |
-1.46 |
-0.52 |
16.1 |
84 |
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2 |
2 |
4 |
1 |
1 |
0 |
0 |
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QUE 401 B
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2 |
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1.90 |
1.95 |
28.8 |
-1.39 |
-0.66 |
9.2 |
88 |
2 |
2 |
6 |
1 |
1 |
0 |
0 |
QUE 401 B
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3 |
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1.88 |
2.22 |
29.6 |
-2.18 |
-0.76 |
21.6 |
87 |
3 |
2 |
4 |
1 |
0 |
0 |
0 |
QUE 401 B
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4 |
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1.59 |
2.54 |
32.4 |
-0.93 |
-0.43 |
11.3 |
81 |
4 |
1 |
5 |
2 |
1 |
1 |
0 |
MSE 83 B QUE 401 B
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5 |
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1.88 |
1.96 |
32.6 |
-1.10 |
-0.61 |
12.8 |
92 |
2 |
2 |
5 |
2 |
0 |
0 |
0 |
QUE 401 B
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6 |
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1.88 |
2.22 |
34.1 |
-1.58 |
-0.79 |
13.9 |
90 |
3 |
2 |
6 |
1 |
0 |
0 |
0 |
QUE 401 B
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7 |
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1.65 |
2.55 |
37.0 |
-0.93 |
-0.57 |
8.7 |
84 |
4 |
1 |
7 |
2 |
1 |
1 |
0 |
MSE 83 B QUE 401 B
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8 |
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2.01 |
2.01 |
37.8 |
-2.41 |
-0.45 |
22.5 |
80 |
3 |
6 |
5 |
1 |
2 |
0 |
0 |
QUE 401 B KAN 402 B
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9 |
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2.01 |
2.01 |
37.9 |
-2.38 |
-0.39 |
20.5 |
79 |
3 |
5 |
6 |
1 |
3 |
0 |
0 |
QUE 401 B KAN 402 B
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10 |
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1.87 |
1.92 |
39.0 |
-2.11 |
-0.39 |
20.0 |
79 |
3 |
5 |
6 |
1 |
3 |
0 |
0 |
KAN 401 A QUE 401 B
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11 |
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1.89 |
1.94 |
42.8 |
-2.17 |
-0.50 |
16.2 |
82 |
3 |
5 |
8 |
1 |
3 |
0 |
0 |
QUE 401 B KAN 402 B
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12 |
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1.89 |
1.94 |
42.8 |
-2.13 |
-0.56 |
16.5 |
83 |
3 |
6 |
7 |
1 |
2 |
0 |
0 |
QUE 401 B KAN 402 B
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13 |
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2.01 |
2.01 |
43.5 |
-1.71 |
-0.51 |
14.8 |
82 |
3 |
5 |
8 |
1 |
3 |
0 |
0 |
KAN 401 A QUE 401 B
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14 |
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2.01 |
2.01 |
44.4 |
-2.09 |
-0.37 |
23.2 |
82 |
6 |
2 |
5 |
1 |
2 |
1 |
0 |
CL 403 A QUE 401 B
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15 |
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1.92 |
1.99 |
47.3 |
-1.53 |
-0.16 |
16.8 |
82 |
4 |
2 |
6 |
3 |
4 |
0 |
0 |
MSE 266 B QUE 401 B KAN 402 B
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16 |
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2.00 |
2.34 |
48.5 |
-1.42 |
-0.31 |
17.6 |
80 |
4 |
2 |
6 |
3 |
1 |
1 |
0 |
MSE 83 A QUE 401 B
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17 |
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1.85 |
1.88 |
49.4 |
-1.96 |
-0.53 |
16.6 |
83 |
6 |
2 |
6 |
1 |
2 |
1 |
0 |
CL 403 A QUE 401 B
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18 |
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1.89 |
1.93 |
52.2 |
-1.36 |
-0.24 |
12.6 |
84 |
4 |
2 |
8 |
3 |
4 |
0 |
0 |
MSE 266 B QUE 401 B KAN 402 B
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19 |
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1.84 |
1.88 |
53.5 |
-1.29 |
-0.41 |
12.5 |
83 |
4 |
2 |
8 |
3 |
1 |
1 |
0 |
MSE 83 A QUE 401 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program