PDBsum entry 4d9f Go to PDB code:  Pore analysis for: 4d9f calculated with MOLE 2.0 PDB id 4d9f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.02 2.85 30.7 -0.65 0.06 22.5 74 2 7 0 6 2 0 0   2 1.50 1.57 37.8 -1.41 -0.40 17.1 85 4 3 3 5 1 2 0   3 1.80 1.95 41.3 -1.76 -0.50 22.4 85 5 4 3 5 1 2 0   4 1.50 1.57 48.3 -1.30 -0.41 18.9 85 5 5 3 6 1 2 0   5 1.79 1.95 48.4 -1.45 -0.42 21.7 85 4 5 3 6 1 2 0   6 1.26 1.25 77.7 -0.83 -0.20 9.4 85 7 5 10 7 4 3 0  DCS 402 A DCS 402 B 7 1.24 1.25 87.8 -1.06 -0.30 11.0 86 7 5 10 9 4 1 0  DCS 401 C DCS 402 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.